Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MSRKVRRHFTDDFKQQIVDLYNVGRK-----------RSSLIKVYELTPSTFDKWVRQAKTTGSFKSVDNL-TDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK-
4OYD Chain:B ((1-117))
ADPKKVLDKAKDQAENRVRELKQKLEELYKEARKLDLTQEMRRKLELRYIAAMLMAIGDIYNAIRQAKQEADKLKKAGLVNSQQLDELKRRLEELKEEASRKARDYGREFQLKLEYG
General information:
TITO was launched using:
RESULT:
Template:
4OYD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6960 for 594 contacts (11.7/contact) +
2D Compatibility (PS) -10417 + (NN) -6477 + (LL) 0
1D Compatibility (HY) 2000 + (ID) 750
Total energy: -8684.0 ( -14.62 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_4OYD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OYD-query.scw
PDB file :
Tito_Scwrl_4OYD.pdb
: