Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVLILGGAGYIGSHMVDQLITQGKEKVIVVDNLVTGHR------------QAVHSDAI-FYEGDLSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIKNIVFSSTAATYGIPEQVPILETAPQNPI-NPYGESKLMMETIMK---WADQAYGIKFVALRYFNVAGDKPDGSIGEDHKP-ETHLLPIILQVAQGVRDKIMIFGDDYNTPDGTNVRDYVHPFDLADAHILAVDYLRQGNESNVFNLGSSTGFSNLQMLEAARRITGKEIPAQKAARRPGDPDTLIASSEKARQILGWEPKFDNIDKIISSAWAWHSSHPNGYED |
| 1I3M Chain:B ((5-344)) | --VLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFM-AVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNV--VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143552 for 2797 contacts (-51.3/contact) +
2D Compatibility (PS) -34471 + (NN) -15389 + (LL) 600
1D Compatibility (HY) -28800 + (ID) 6650
Total energy: -228262.0 ( -81.61 by residue)
QMean score : 0.537
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