Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKEHQKIVVALGGNAILSTD--ASAKAQQEALINTSKSLVKLIKEGHDVIVTHGNGPQVGNLLLQQAASDSEKNPAMPLDTCVAMTEGSIGFWLQNALNNELQEQGIDKEVATVVTQVIVDEKDQAFTNPTKPIGPFLSEEDAKKQAQETGSKFKEDAGRGWRKVVPSPKPVGIKEASVIRRLVDSGVVVISAGGGGVPVIEDANTKALKGVEAVIDKDFASQTLSELVDADLFIVLTGVDNVFVNFNKPNQEKLEEVTVSQMKQYITENQFAPGSMLPKVEAAIAFVENKPESRAIITSLENIDNVLAQNAGTQIVAN |
3KZF Chain:C ((6-315)) | -----KTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAA-AGVSPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFY-----------------------WRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRE--NKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACINYK----RKLEEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGK-MSIITSLSTAVDALNGKCGTRIIKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148267 for 2422 contacts (-61.2/contact) +
2D Compatibility (PS) -29942 + (NN) -8121 + (LL) 1440
1D Compatibility (HY) -27200 + (ID) 5950
Total energy: -218040.0 ( -90.02 by residue)
QMean score : 0.522
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