Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGTLV-A--PP---LTNLRS----ITESQNTTLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFD-FEYLRPQDREAYNQFLREARDLFHREGLEISTALAPKTSATQ-QGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGGPPQAVSPIGPVRDVIEYAL-TEMPANKIVMGQNLYGYDWTLPYTAGGTPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR |
| 3BXW Chain:B ((78-393)) | -------------------------------------------------------------------------------------------------AGDVLGYVTPWNSH---G-YDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWT-----YDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLS-KRVGLIHMLTHLAEALHQARLLALLVIPPAITPGTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAH-QPGPNAPLSWVRACVQVLDPKSKWRSKILLGLNFYGMDYATSKDAR----EPVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGV-GVSIWELGQGLDYFYDLL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129622 for 2470 contacts (-52.5/contact) +
2D Compatibility (PS) -31554 + (NN) -5181 + (LL) 8172
1D Compatibility (HY) -17600 + (ID) 2950
Total energy: -178735.0 ( -72.36 by residue)
QMean score : 0.453
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