Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
3UWO Chain:A ((11-195))
--GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPV-------------RLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3UWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69625 for 1324 contacts (-52.6/contact) +
2D Compatibility (PS) -19169 + (NN) -9165 + (LL) 3304
1D Compatibility (HY) -9200 + (ID) 3700
Total energy: -107555.0 ( -81.23 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3UWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWO-query.scw
PDB file :
Tito_Scwrl_3UWO.pdb
: