Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIVDLCTGNGIVPLLLSTRS-KADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTLEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK
3TM4 Chain:A ((217-350))--------------------------------------------DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS--QYVDSVDFAISNLPYG------------------SMIPDLYMKFFNELAKVLEKRGVFITTEKK----AIEEAIAENGFEIIHHR----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49479 for 961 contacts (-51.5/contact) +
2D Compatibility (PS) -13466 + (NN) -7475 + (LL) 8812
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: -64458.0 ( -67.07 by residue)
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_3TM4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TM4-query.scw
PDB file : Tito_Scwrl_3TM4.pdb: