Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAERDGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFVENVLPVWKEAYRVLKRNGILISGFVNPVVFLFDTELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGFVLDQYIHTYSATRSVKV |
| 3L8D Chain:A ((53-202)) | ---------------------------------------------------------KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG--PDLSFIKGDLSSL-PFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENS--------------Y---P---------RLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYK------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71140 for 1121 contacts (-63.5/contact) +
2D Compatibility (PS) -16064 + (NN) -2573 + (LL) 6756
1D Compatibility (HY) 0 + (ID) 1550
Total energy: -84571.0 ( -75.44 by residue)
QMean score : 0.352
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