Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSGKFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVS----HISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKAAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPL--AQGGTAWSKVRFLKAAAEKLTQN |
2CHU Chain:A ((10-296)) | ---------------------------LPISMSDEGDSFLVKDSLGENKIPKNPSKVVIL-DLGILDTFDALKLNDKVVGVPAKNLPKYLQQFKN-KPSVGGVQQVDFEAINALKPDLIIISGR-QSKFYDKLKEIAPTLFVGLDNANFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDED---KKALIILTNSNKISAFGPQSRF-GIIHDVLGINAVDE---NIKGKSINSEFILEKNPDYIFV-VDRNVILGNKERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43231 for 2290 contacts (-18.9/contact) +
2D Compatibility (PS) -30120 + (NN) -19804 + (LL) 3232
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -104123.0 ( -45.47 by residue)
QMean score : 0.512
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