Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESELAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHIPFAAALHPKWTSYYYQHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVS----MDSISPEEQDRLNRIAEVMYLP-SEESWRTHFLQTASFLKEESEAEKWLADYDQQTTAAKKTLQHVQG-LRFLFLRLHKQNFYLAHNRSVREVFFGDLGFSSATTADTPSEQ--------AISLENIANYQADCMMLFLFKEPETIAYYQQLQQTEAWQNLSAVRDNRVYLLSLDPWNEYSACGHERIVQQTVSLLSGDCP------- |
3R5T Chain:A ((3-298)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVWPRTFQNADG--SITTIPSQPKRILSTAVTVTGTLLAIDAPVIASAATTQ--STFFEQWRKLAELR-QVKKLWPAGSVDLESVYVEQPDLIVVSMIGADS-ARDQIPLLQAIAPTILVDYSDQTWQSLAQQLGLATGLEEQAERTIHNFEQWTKQVRDVLDLPKGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETTFLI----TMTDQQAQAFLHDPILKNLPSIQRKQVYGLGENSFR-IDLFSAREIINSLLRRFAGEQAQSLVMPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139874 for 2268 contacts (-61.7/contact) +
2D Compatibility (PS) -28266 + (NN) -3425 + (LL) 19952
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -161963.0 ( -71.41 by residue)
QMean score : 0.307
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