Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MTWHEVN-DVIVITLPEIFDMNANLGYLTREKNECMYEIENNIITKVIAIGEIRSLVQVSVINNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLTPFYE-MAKADPLLKMPARKFYGLRVIGIPDLFEALCWGVLGQQINLAFAYSLKKQFVEAFG-DSIEWNGKKYWVFPPYERIARLTPTDLADIKMTVKKSEYIIGIARLMAS---GELSREKLMKMNFKDAEKNLIKIRGIGPWTANYVLMRCLRFPTAFPIDDVGLIHSIKIL---------RNMNRKPTKDEILEISVPWKEWQSYATFYLWRVLY-- |
| 1EBM Chain:A ((1-317)) | GSEGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLAD----QVWTLTQTEEQLHCTVYRSQ-------------ASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLR-QDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTQVADCICLMALDKPQAVPVDVHMWHIAQRDYSWHPTTSQAKGPSPQTNKELGNFFRSLWGPYAGWAQAVLFSADLRQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184452 for 2260 contacts (-81.6/contact) +
2D Compatibility (PS) -30002 + (NN) -3197 + (LL) 1704
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -228347.0 ( -101.04 by residue)
QMean score : 0.456
|
|
|