Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI---
1SMT Chain:A ((24-121))
ELQAIAPEVAQSLAEFFAVLADPNRLRLLSLLARSEL---------------CVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALYQNALDHLQEC
General information:
TITO was launched using:
RESULT:
Template:
1SMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34672 for 526 contacts (-65.9/contact) +
2D Compatibility (PS) -9166 + (NN) -2924 + (LL) 688
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -52224.0 ( -99.29 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1SMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SMT-query.scw
PDB file :
Tito_Scwrl_1SMT.pdb
: