Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSHDDRDIDT----VLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLSGVDRLKVRGFHL---------LTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAI-NFKQFFNADMEHELLQSYQNGSKSVNLPAPK-ETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADIKELRGTHSIYLYQPDQIYKLSMEFMRKVR- |
1Y37 Chain:A ((1-294)) | MFEGF--------------------------------------ERRLVDVGDVTINCVVGGSGPALLLLH---GFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHDRGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAG------LMHSLFEMQVVWAPRLANMRFASLPGGHFFVDRFPDDTARILREFLSDARS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66146 for 2435 contacts (-27.2/contact) +
2D Compatibility (PS) -28745 + (NN) -6671 + (LL) 4448
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -104464.0 ( -42.90 by residue)
QMean score : 0.350
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