Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYT-GMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTS---GSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 1IZL Chain:A ((32-344)) | WFGVIMIPTLLAATICFVIAFIAAPPVDIDGIREPVSGSLLYGNNIITGAVVPSSNHFYPIWEAASLDEWLYNGGP-YQLIIFHFLLGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA-EHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFGA---HGYFGRLIFQYASFNNSRSLHFFLAAWRVVGVWFAALGISTMAFNLNGFNFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32651 for 1767 contacts (18.5/contact) +
2D Compatibility (PS) -27687 + (NN) 7136 + (LL) 40
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -110.0 ( -0.06 by residue)
QMean score : -0.097
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