Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYEGLEDLKVDTVNRKTLAKQVIERIVHLLSSGQLRAGDKLPTEMELMDILHVSRPVLREALSSLETLGVITRKTRGGTYFNDKIGMQPF---SVML----ALATDNLPAIIEARMALELGLVTIAAEKINEEELQRLQKTIDDIANSTDNHYGEADKEFHRIIALSANNPVVEGMIQSL-L-ITH-AKIDSQIPYRERDVTVEYHKKIYDALAKRDPYKAHYHMYEHLKFVRDKILKGMDEK
1HW1 Chain:A ((5-228))--------------AQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVAD--HADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRH-YFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQK--


General information:
TITO was launched using:
RESULT:

Template: 1HW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 811 -101347 -124.97 -473.58
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -124.97
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_1HW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HW1-query.scw
PDB file : Tito_Scwrl_1HW1.pdb: