Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFIHIVGPGDSLFSIGRRYGASVDQIRGVNGLDETNIVPGQALLIPLYVYTVQPRDTLTAIAAKAFVPLERLRAANPGISPNALQAGAKITIPSISNYIAGTLSFYVLRNPDL-DRELINDYAPYSSSISIFEYHIAPNGD------------------------------IA-NQLN-D-----------------AAAIE--TTWQRRVTPLATITNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTIDFEQVSA----------ADRDLFTGFLRQLRDRLQAG------GYVLTIAVPAKTSDNIPWLRGYDYGGIGAVVNYMFIMAYDWHHAG-SEPGPVAPITE----------------IRRTIEFTI-AQVPSRKIIIGVPLYGYDWIIPYQPGT---------------VASAISNQNAIE-RAMRYQAPIQYSAEYQSPFFRYSDQQGRTHEVWFEDVRSMSRKMQIVREYRLQAIGAWQLTLGFTPGPWLLRKFFTIRKV
1ITX Chain:A ((9-417))------------------------------------------------------------------------------------------------ADSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLKTIISVGGWTW----SNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASAT----YAANTELAKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLEANYINKNGYTRYWNDTAKVPYLYNAS---NKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNK--TLQNKLKA----


General information:
TITO was launched using:
RESULT:

Template: 1ITX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1760 -197685 -112.32 -643.92
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -112.32
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_1ITX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ITX-query.scw
PDB file : Tito_Scwrl_1ITX.pdb: