Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGIVGATGYGGTELVRILSHHPHAEECILYS--S-SGEGNVYSEGYPHLTGLADQQLKPID--M-NTI-KHEIDIMFLAAPPGVSSELTPKLADAGITVIDLSGDLRIKEPAEYEKWYKRTAA-PKAVIQEAVYGLAELNQLQIQQAKLIANPGCFPTAVLLGLAPLAQK-KLLDESF-VIVDAKTGVSGAGRKASMGTHFSELNDNFKIYKV-NEHQHTPEIEQALNEWQPGLGPITFSAHLVPMTRGIMATMYTRLTCDLTADDLHDLYSEFYQDSYFVRVRPKGQYPQTKEVYGSNFCDIAVTLDERTNRVTIVSVIDNLMKGAAGQAVQNFNLMNGWNEETGLTITPIYP
3DR3 Chain:A ((5-336))LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIV---ELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYP-ELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLL-DLNQWPVINATSGVSGAGRKAAISNSFCE--VSLQPYGVFT-HRHQPEIATHLG-----A-DVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHKPLVRLYDK-GVPALKNVVGLPFCDIGFAVQ--GEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSL-------


General information:
TITO was launched using:
RESULT:

Template: 3DR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1923 -223672 -116.31 -696.80
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -116.31
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_3DR3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DR3-query.scw
PDB file : Tito_Scwrl_3DR3.pdb: