Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDNDKFKEELAKLPEVDPMTKMLVQNIFSKHGVTKDKMKKVSDEEKEMLLNLVKDLQAKSQALIENQKKKKEEAAAQEQKNTKPLSRREQLIEQIRQRRKNDNN
3VPG Chain:A ((271-307))--------------------------RILGAGGVEGTVYPSLSPEEREALRRSAEILKEAAFA------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 24 -1197 -49.85 -32.34
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -49.85
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_3VPG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VPG-query.scw
PDB file : Tito_Scwrl_3VPG.pdb: