Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKIYVLDTNVLLQDPNAIFSFEENEVVIPAVVLEEVDSKKRYMDEVGRNARHVSKLIDALRQKGRLHEHVPLDTGGTLRIELNHRSFHQLQEIFIEKTNDNRILAVAKNLSLEEETKENGRPVILVSKDVLVRVKADAIGLLAEDFLNDRVVDNDEMYSGYKDLYISQQLFSSFYGKNQISVNDVKQHAFYPNQFALMKDELGGSSSAVGIADKTGTVLKRLVFDDEHIWGIRPKNVQQTMALELLLREDIPLVTLIGKAGTGKTLL-ALAAGLLQTED-LGIYKKLVVARPIVPVGKDIGYLPGEKEEKLKPWMQPIFDNLEFLFNAKK------PGE----------------LDAILAGIGSIQVEALTYIRGRSIPDQFIIIDEA-QNLTRHEVKTLLTRVG-----EGSKIVL-MGDPEQIDHPYLDSLNNGLAYVVERFKGQPISGSVKLLKGERSGLAQLAADLL
1Z47 Chain:A ((40-210))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLP-PQKRNVGLVFQN--YALFQHM-TVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPH-ELSGGQQ--QRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEAL---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 542 -39251 -72.42 -280.36
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -72.42
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_1Z47.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z47-query.scw
PDB file : Tito_Scwrl_1Z47.pdb: