Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLEEGKVSFVQEVHS
3QW4 Chain:B ((288-432))--------------------YID-LRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRRE----------------------A--AIEGE-YKKGDRVVIIDDLVST-ETKVEAIEKLRSAGLEVVSIVVLVDRDM-GAKAFLNKLGYDFEAVVGLHQLLPLW---------


General information:
TITO was launched using:
RESULT:

Template: 3QW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 645 -110951 -172.02 -809.86
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -172.02
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_3QW4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QW4-query.scw
PDB file : Tito_Scwrl_3QW4.pdb: