Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIASSTASSEFLKNPYSFYDTLRAVHPIYKGSFLKYPG----WYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKD--KLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNL----ADFEWRYRPLFGFRALEELPVTFE
2WI9 Chain:B ((41-425))--------GQDFAADPYPTYARLRAEGPAHR---VRTPEGNEVWLVVGYDRARAVLADPRFS--KDWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMS-------GYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPM--IRGLKALPIRW-


General information:
TITO was launched using:
RESULT:

Template: 2WI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1743 13481 7.73 36.24
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : 7.73
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_2WI9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WI9-query.scw
PDB file : Tito_Scwrl_2WI9.pdb: