Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
1W4R Chain:D ((19-187))------RGQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTR---------------ALPACLLRDVAQE-ALGVAVIGIDEGQFFP-DIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRL------GTEKEVEVIGGADKYHSVCR-----------


General information:
TITO was launched using:
RESULT:

Template: 1W4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 830 -105548 -127.17 -680.95
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain D : 0.76

3D Compatibility (PKB) : -127.17
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_1W4R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W4R-query.scw
PDB file : Tito_Scwrl_1W4R.pdb: