Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLELAILGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPALRRMQADGLIAENAAPAGTPVRRARRVYQLTDKGRRRFGELVADTGPHNYTDDGFGVHLAFFNRTPAEARMRILEGRRRQVEERREGLREAVAR------ASSSFDRYTRQLHQLGLESSEREVKWLNELIAAERAAPNPAEQT
1YG2 Chain:A ((2-179))
SLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGL-----------VTCVLEVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVEESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA------
General information:
TITO was launched using:
RESULT:
Template:
1YG2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70934 for 1009 contacts (-70.3/contact) +
2D Compatibility (PS) -18035 + (NN) -9523 + (LL) 604
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -105838.0 ( -104.89 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_1YG2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YG2-query.scw
PDB file :
Tito_Scwrl_1YG2.pdb
: