Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTR-AALPAIRPVNHLVVD--GRVIGRTR--LTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARY-QRLLHPWV---NMAMDTVVAIEPEIVTGIRIVADSRTP
2ASF Chain:A ((11-133))
--------------------SDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADR------SGLAVLSQVD------GARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTPRPNPRRVVIEVQIERVLGSADL------
General information:
TITO was launched using:
RESULT:
Template:
2ASF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64137 for 831 contacts (-77.2/contact) +
2D Compatibility (PS) -12431 + (NN) -3547 + (LL) 1612
1D Compatibility (HY) 2000 + (ID) 950
Total energy: -77453.0 ( -93.20 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_2ASF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ASF-query.scw
PDB file :
Tito_Scwrl_2ASF.pdb
: