Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MTLKVKGEGLGAQVTGVDPKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMYHHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
1GQW Chain:A ((4-282)) | RLSITPLGPYIGAQISGAD-RPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALAQRFGELHIH-PVYPHAEGVDEIIVLDTHNDN--PPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVS-EKESEALLSFLFAHI------TKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILG--DKPFYRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125952 for 2285 contacts (-55.1/contact) +
2D Compatibility (PS) -29790 + (NN) -14161 + (LL) -184
1D Compatibility (HY) -3600 + (ID) 3500
Total energy: -177187.0 ( -77.54 by residue)
QMean score : 0.475
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