Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MVPVETLHSGDPITDVNGGGQRYIVLESKTVGDSCVVLELESRVNHQLQVIEKSFPAGYHVGRAHHRIL------------------------------------------------------------------------------------------------------------------------- |
| 4G6D Chain:B ((1-198)) | MKLKILDKDNATLNVFHRNKEHKTIDNVPTANLVDWYPLSN----AYEYKLSRNGE--------------YLELKRLRSTLPSSYGLDDNNQDIIRDNNHRCKIGYWYNPAVRKDNLKIIEKAKQYGLPIITEEYDANTVEQGFRDIGVIFQSLKTIVVTRYLEGKTEEELRIFNMKSEESQLNEALKESDFSVDLTYSDLGQIYNMLLLMKKISK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6088 for 248 contacts (-24.5/contact) +
2D Compatibility (PS) -5476 + (NN) -2027 + (LL) 948
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -15893.0 ( -64.08 by residue)
QMean score : 0.202
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