Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAILRGRAPLRLGLGGGGTDVEPYSSQFGGRILSVTIDKYAYAFAERGTGD--EIAFRSPDRDRA-GQASID-D---L--ASL-EEDFPLHVAVYRRVIAEF--------N-GGTPFPLQLATQVDAPPGSGLGSSSALVVAMLLTTCALI--GSSPGPYELARLAWEIERVDLGMAGGWQDHYAAAFGG---FNFMESRPNGEVVVNPLRIRREVIAELEASLLLYFGGVSRLSSE-----VI-----------------------------------ADQQRNVVER------D-------------------------------------------ADA----L----------AATHSIC------AEALEMKDLLVVG-------DIPGFADSLLRGWQAKKRTSTRISNPAIEHAYQVAQSSGMVAGKVSGAGGGGFLMMIVDPRR---RIEVARSLERECGGSVAPCLFTKGGAVTWHIPESTAPVRRGVADAVASALGNAGILLCAGCVLATSHSTWRVPV |
| 3V2U Chain:C ((39-486)) | --DFIARSPGRVNLIGEHIDY------CDFSVLPLAIDVDMLCAVKILDEKNPSITLTNADPKFAQRKFDLPLDGSYMAIDPSVSEWSNYFKCGLHVAHSYLKKIAPERFNNTPL-VGAQIFCQSDIPTGGGLSSAFTCAAALAT-IRANMGKNFDISKKDLTRITAVAEH-YVGVNNGGMDQATSVYGEEDHALYVEFRPKL--KATPFKFPQL--KNHEISFVIANTLVKSNKFETAPTNYNLRVIEVTVAANALATRYSVALPSHKDNSNSERGNLRDFMDAYYARYENQAQPWNGDIGTGIERLLKMLQLVEESFSRKKSGFTVHEASTALNCSREEFTRDYLTTFPVRFQVLKLYQRAKHVYSESLRVLKALKMMTSATFHTDEDFFTDFGRLMNESQASCDKLY-ECSCIETNQICSIALANGSFGSRLTGAGWGGCTIHLVPSGANGNVEQVRKALI----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150481 for 2495 contacts (-60.3/contact) +
2D Compatibility (PS) -32903 + (NN) -12911 + (LL) 5040
1D Compatibility (HY) -5600 + (ID) 2800
Total energy: -199655.0 ( -80.02 by residue)
QMean score : 0.448
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