Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKACVVKELSGPSGMVYTDIDEVSGDGGKVVIDVRAAGVCFPDLLLTKGEYQLKLTPPFVPGMETAGVVRSAPSD-AGFHVGERVSAFG-VLGGYAEQIAVPVANVVRSPVELDDAGAVSLLVNYNTMYFALARRAALRPGDTVLVLGAAGGVGTAAVQIAKAMQAGKVIAMVHREGAIDYVASLGADVVLPLTE-GWAQQVRDHTYGQGVDIVVDPIGGPTFDDALGVLAIDGKLLLIGFAAGAVPTLKVNRLLVR-NISVVGVGWGEYLNAVPGS-AALFAWGLNQLVFLG-LRPPPPQRYPLSEAQAALQSLDDGGVLGKVVLEP |
| 3JYN Chain:A ((2-325)) | AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK-LIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYAN-NAQNLQTMADELFD-MLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257242 for 2845 contacts (-90.4/contact) +
2D Compatibility (PS) -35062 + (NN) -19782 + (LL) 392
1D Compatibility (HY) -12000 + (ID) 4350
Total energy: -328044.0 ( -115.31 by residue)
QMean score : 0.482
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