Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTL--GGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVE-GVAVRADWRGQRLVSA-LLDAVEQVMR----GAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
2OB0 Chain:A ((2-155))
-----SKGSRIELGDVTPHNIKQLKRLNQVIFPVSYNDKFYKDVLEVGELAKLAYFNDIAVGAVC-----CRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGF------EIIETKKNYYKRIEPA-DAHVLQKNL------------------
General information:
TITO was launched using:
RESULT:
Template:
2OB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87424 for 1043 contacts (-83.8/contact) +
2D Compatibility (PS) -16040 + (NN) -7743 + (LL) 2292
1D Compatibility (HY) -7200 + (ID) 750
Total energy: -116865.0 ( -112.05 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_2OB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OB0-query.scw
PDB file :
Tito_Scwrl_2OB0.pdb
: