Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEIATTSGARSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYTRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTIDMYDRGNCFIFADGAAAVVV--GETPFQGIGPTVAGSDGEQADAIRQ--DIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTGAAKPG--DLALLIGYGAGLSYAAQVVRMPKG |
3IL5 Chain:D ((33-341)) | --------------------YVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQ-ENTSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPH--FLNEKLQADGQRWAALTSGYTINESPFYQGHKQASKTLQMEGRSIFD---FAIKDVSQNILSL--VTDETVDYLLLHQANVRIIDKIARKTKISREKFLTN-MDKYGNTSAASIPILLDEAVENGTLILGSQQRVVLTGFGGGLTWGSLLLTL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206020 for 2708 contacts (-76.1/contact) +
2D Compatibility (PS) -32555 + (NN) -15973 + (LL) 1304
1D Compatibility (HY) -21200 + (ID) 5000
Total energy: -279444.0 ( -103.19 by residue)
QMean score : 0.541
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