Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRFLTSIVAWLRAGYPEGIPPTDSFAVLALLCRRLSHDEVKAVANELMRLGDFDQIDIGVVITHFTDELPSPEDVERVRARLAAQGWPLDDVRDREEHA
1UCR Chain:A ((1-74))
MEEAKQKVVDFLNS--KSGSKSKFYFNDFTDLFPDMKQREVKKILTALVNDEVLEYWSSGSTTMYGLKG------------------------AGKQAAA
General information:
TITO was launched using:
RESULT:
Template:
1UCR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36963 for 472 contacts (-78.3/contact) +
2D Compatibility (PS) -7915 + (NN) -984 + (LL) 1392
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -47070.0 ( -99.72 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1UCR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UCR-query.scw
PDB file :
Tito_Scwrl_1UCR.pdb
: