Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MRRGELWFAATPGGDRPVLVLTRDPVADRIGAVVVVALTRTRRGLVSELELT-------------AVENRVPS---DCVVN----------FDNIHTLPRTAFRRRITRL-SPARLHEACQTLRASTGC------------
1B93 Chain:A ((1-148))
MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLA
General information:
TITO was launched using:
RESULT:
Template:
1B93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55184 for 687 contacts (-80.3/contact) +
2D Compatibility (PS) -10497 + (NN) 294 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -69187.0 ( -100.71 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_1B93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B93-query.scw
PDB file :
Tito_Scwrl_1B93.pdb
: