Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAVALPRVSGGHDEHGHLEEFRTDPIGLMQRV-RDECGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAA--LRGEQMKGHAATIEDQVRRMIA-DWGE-AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR-FAKLYHELERGTDPLAYVDPYL---PIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM--RHRDAYAAVIDELDELYGDGRSVSF-HALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAC-VRYRRRTGV |
| 2WX2 Chain:A ((29-462)) | ----------------GHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPLP---RCREARAELQKILGEIIVAREKE-------SDLLGGLLKAVYRDGT-RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPA---QLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDG-------AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLR-DEVPDPDYHTMVVGPTLNQCLVKYTRK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WX2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246382 for 3401 contacts (-72.4/contact) +
2D Compatibility (PS) -43790 + (NN) -20829 + (LL) 792
1D Compatibility (HY) -37200 + (ID) 7100
Total energy: -354509.0 ( -104.24 by residue)
QMean score : 0.616
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