Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAE--GAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
3B0P Chain:A ((2-318)) | -------------------LDPRLSVAPMVDRTDRHFRFLVRQVSLG-----VRLYT-EMTVDQAVLRGN--RERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGY-DEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV---RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSA---LIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVYEDPFVLEEADRRVFGLPRRPS-----RLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213746 for 2604 contacts (-82.1/contact) +
2D Compatibility (PS) -32969 + (NN) -15170 + (LL) 2220
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -281115.0 ( -107.96 by residue)
QMean score : 0.457
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