Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MDAAQVI------------EPAHAGQDVDEAAVAARELSGAERALVGDLVRQARAEGVALTGPDGLLKALTKTVLEAALQ--EEMTEHLGYDRHAAAGRGSGN---SRNGSRNKKVITDACGQVEIAVPRDRNGTFEPVIVGKRKRRVT---------------DVDRVVLSLYAKGLTTGEIAAHFADVYGVSVSKDTISRITDRVIEEMQAWWSRPLEKVYAAVFIDAI-----MVKIRDGQVRNRPVYAAIGVDLDGHKDI---------------LGMWAGEGDGESAKFWLAVLTDLRNRGVKDIFFLVCDGLKGLPDSVSAAFPLATVQTC--------IIHLIRNTFRYASRKYWDKISVDLKPIYTAASAAEARLRYEEFAEKWGKPY-----PAITRLWDSAWEEFIPFLD-YDVEIRRVPCSTNAIESLNARYRRAVRARGHFPNEQSALKTLYLVTRSLDPKGTGQTKWAVRWKPALNALAITFADRMPAAEER-- |
| 3HM6 Chain:X ((72-638)) | IPFLDYKVYAERIFFPGHSPLHRDLGVPESRRPTVEQGLGQLSNLLN-SKLFLTKFIHTLETQRTFSARDRAYVASLLTVALHGKLEYFTDILRTLLSDLVAQYVAKNPKLMLRRTETVVEKLLTNWMSICLYTFVRDSVGEPLYMLFRGIKHQVDKGPVDSVTGKAKYTLNDNRLLREDVEYRPLTLNALLAAQGVPVKVLDCDTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWRSGVAGHLILSDEDVTSEVQGLWRRLNTLQHYKVPDGATVALVPCGGIRPWHLVKPSIPEIYLTRLLSMKGTLQKFVDDLFQVILSTSRPVPLAVKYFFDLLDEQAQQHGISDQDTIHIWKTNS--LPLRFWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLADSPINKLLYARDIPRYKRMVERYYADIRQTVPAS--DQEMNSVLAELSWNYSGDLGARVALHELYKYINKY------YDQIITALEEDGTAQKMQLGYRLQQIAAAVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50908 for 3129 contacts (16.3/contact) +
2D Compatibility (PS) -43887 + (NN) 5041 + (LL) -44
1D Compatibility (HY) 16400 + (ID) 1250
Total energy: 27168.0 ( 8.68 by residue)
QMean score : -0.001
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