Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTGSVTVRVPGKVNLYLAVGDRREDGYHELTTVFHAVSLVDEVTVRNADVLSLELVGEGADQLPTDERNLAWQAAELMAEHVGRAPDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLGSDVPFALHGGTALGTGRGEELATVLSRNTFHWVLAFADSGLLTSAVYNELDRLREVGDPPRLGEPGPVLAALAAGDPDQLAPLLGNEMQAAAVSLDPALARALRAGVEAGALAGIVSGSGPTCAFLCTSASSAIDVGAQLSGAGVCRTVRVATGPVPGARVVSAPTEV |
| 2V8P Chain:A ((3-264)) | ---HMIKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIREGV-LR--VETN--IGIP-QEENLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFV----TPEYAEEKIQRIISGEVEEIENVLGDIAR----ELYPEINEVYRFVEYLG-FKPFVSGSGSTVYFFGGASEEL---KKAAKMRGW----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2V8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136904 for 2193 contacts (-62.4/contact) +
2D Compatibility (PS) -29562 + (NN) -20862 + (LL) 2584
1D Compatibility (HY) -16400 + (ID) 3650
Total energy: -204794.0 ( -93.39 by residue)
QMean score : 0.406
|
|
|