Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAW-----QDHAEVSVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCG-------VPYTDAL-------PEMPEPAIEVEP-PVCD---CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
4UTZ Chain:B ((26-275))
--IAIITGAGVSAESGVPTFRG-PGGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMECT-----FKYHFEGPCGSTLPPALE-------
General information:
TITO was launched using:
RESULT:
Template:
4UTZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106860 for 1743 contacts (-61.3/contact) +
2D Compatibility (PS) -24084 + (NN) -14187 + (LL) 736
1D Compatibility (HY) -18400 + (ID) 4800
Total energy: -167595.0 ( -96.15 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_4UTZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UTZ-query.scw
PDB file :
Tito_Scwrl_4UTZ.pdb
: