Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL--PEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPR------YGE-GVYALRNMDEGFVPELYDPEILTARYSVGAVDAVRRTRELVHTEGIFAGISTGAVLHAALGVGAGALAAGERADIALVVADAGWKYLSTGAYAGSLDDAETALEGQLWA |
3X43 Chain:F ((2-305)) | -PLFNSILDTIGRTPIVRLQRMAPE--------HTSVYVKVESFNPGGSVKDRLALSVVLDAEAKGLLKPGDTIVECTSGNVGIALAMVAAARGYRFVAVMGDTYSVERRKLIRAYGGKLVLFPGHLGSKGGNLIADELAEKY-GWFRARQFDNPANPSYHRETTASEILADFAGKRLDHFVTGFGTTGTLTGVGQMLRVARPEVRVVALEPSNAAMLARGEWSPHQIQGLAPNFVPGVLDRSVIDDLVTMDEVTARDTSRRLAAEEGIFAGISAGATVATALSI---AEHAPEGTVLLAMLPDTGERYLSTFLFDG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151280 for 2696 contacts (-56.1/contact) +
2D Compatibility (PS) -32445 + (NN) -11214 + (LL) 556
1D Compatibility (HY) -21600 + (ID) 6200
Total energy: -222183.0 ( -82.41 by residue)
QMean score : 0.514
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