Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAE--DFVRAYVQKGGQ-----------------------------
3HZQ Chain:A ((1-94))
-MLKEFKEFALKGNVLDLAIAVVMGAAFNKIICSLVENIIMPLIGKIFGSVDFAKEWSFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTLMKKE
General information:
TITO was launched using:
RESULT:
Template:
3HZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18682 for 247 contacts (75.6/contact) +
2D Compatibility (PS) -6790 + (NN) -1306 + (LL) 208
1D Compatibility (HY) -2000 + (ID) 350
Total energy: 8444.0 ( 34.19 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_3HZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZQ-query.scw
PDB file :
Tito_Scwrl_3HZQ.pdb
: