Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVV---RAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGN-TVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAAT
1ZUI Chain:A ((11-151))
-----VLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPH--VISTGGGIVMHENLKGL---GTTFYLKMDFETLIKRLNQ-REKRPLLNNLTQA---KELFEKRQALYEKNASFIID---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZUI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55195 for 992 contacts (-55.6/contact) +
2D Compatibility (PS) -15035 + (NN) -3585 + (LL) 2000
1D Compatibility (HY) -12400 + (ID) 2450
Total energy: -86665.0 ( -87.36 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUI-query.scw
PDB file :
Tito_Scwrl_1ZUI.pdb
: