Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIASVPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFGRLDIVVANAGIAMMQAGD----DGWRDVIDVNLTGVFHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQNIRVNSVHPCGVDTPMINNEFFQQWLTTADMDAPH---NLGNALP-VELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR
4RGB Chain:B ((23-294))-----LDGRVVFITGAARGQGRSHAVMCAEQGANIVGVDICEDIDIVPYKLGTYEELEETARLVEKTGQEMLFRKADVRDKAVLQEVFDAGVEQFGHIDTVIANAGVVLTNPDERDASEALRLGLDIMLIGVWNTFQVAIPHMKERGQGGNLIATSSMIALLDLTDGRGGTDAYLTSKLAITGLVRSYALMLAADRIRVNGVAPTNCSTPMITE---NPALFKVIEENPHLVNAMSTALPDFPMIEPRDVSNAILFLISDAGRSFTGSVLKVDAGMDVKR


General information:
TITO was launched using:
RESULT:

Template: 4RGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194008 for 2378 contacts (-81.6/contact) +
2D Compatibility (PS) -28017 + (NN) -7452 + (LL) 664
1D Compatibility (HY) -21600 + (ID) 5750
Total energy: -256163.0 ( -107.72 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_4RGB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RGB-query.scw
PDB file : Tito_Scwrl_4RGB.pdb: