Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVKNTIAATSFAAAGLAALAVAVSPPAAAGDLVGP--------GCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSS----LLTSILTY-HVVAGQTSPANVVGT-RQTLQGASV--TVTGQGNSLKVGNADVVCGGVSTANATVYMIDSVLM--PPA
3B21 Chain:A ((21-212))
-NVNVKKLLESLNSKSLGDMDKDSELAATLQKMINPSGGDGNCSGCALHACMAMLGY----GVREAPVPNEISE---------YMTGFFHRHLEQIDSEG-----IVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLDVQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC
General information:
TITO was launched using:
RESULT:
Template:
3B21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26594 for 1294 contacts (-20.6/contact) +
2D Compatibility (PS) -18348 + (NN) -5543 + (LL) 1236
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -57049.0 ( -44.09 by residue)
QMean score : 0.132
(partial model without unconserved sides chains):
PDB file :
Tito_3B21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B21-query.scw
PDB file :
Tito_Scwrl_3B21.pdb
: