Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPE------------------------DHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS--D------GRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWMC--CIGSSWMHLSTGVI-GPER-RYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 3C5A Chain:A ((3-241)) | -------------------------------------------------------------------------LVAEPFAKLEQD---FGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGS-ALAAPQRQQFVDWLKGN------TTG-NHRIRAAVPADWAVGDKTGTCGVYG-----TANDYAVVWPTGRAPIVLAVYTRAP----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102651 for 1676 contacts (-61.2/contact) +
2D Compatibility (PS) -22678 + (NN) -13281 + (LL) 7724
1D Compatibility (HY) -1600 + (ID) 1850
Total energy: -134336.0 ( -80.15 by residue)
QMean score : 0.521
|
|
|