Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK |
4PDI Chain:A ((1-271)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVL---TGFEQLKKELTGKTIQGISRRGKYLIFEIGD-------DFRLISHLRMEGKYRLATLDAPREKHDHLTMKFADGQLI-YADVRKFGTW---ELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIR-----ALGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124375 for 2164 contacts (-57.5/contact) +
2D Compatibility (PS) -28395 + (NN) -10910 + (LL) 1340
1D Compatibility (HY) -17600 + (ID) 4550
Total energy: -184490.0 ( -85.25 by residue)
QMean score : 0.449
|
|
|