Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDVDTDGLAKTVR--LAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVA----DGEDQQTFAEFFDRR---LALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK |
2ZTM Chain:C ((2-236)) | ---LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE--TAGQGITANAICPGWVRSPLVEKQISALAEK---------ELLSEKQPSLQFVTPEQLGGTAV---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91795 for 1826 contacts (-50.3/contact) +
2D Compatibility (PS) -23197 + (NN) -7054 + (LL) 4856
1D Compatibility (HY) -10400 + (ID) 3600
Total energy: -131190.0 ( -71.85 by residue)
QMean score : 0.484
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