Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVVGAVLPELKLYGDPTFIVSTALATRDFQDVHHDRDKAVAQGSKDIFVNILTDTGLVQRYVTDWA-GPSALIKSIGLRLGVPWYAYDTVTFSGEVTAVNDGL--ITVKVVGRNTLGDHVTATVELSMRDS
3IR3 Chain:A ((16-145))
-IKVGDRA-ELRRAFTQTDVATFSELTGDVNPLHLNEDF--------TIVHGVLINGLISALLGTKMPGPGCVFLSQEISFPAPLYIGEVVLASAEVKKLKRFIAIIAVSCSVIESKKTVMEGWVKVMVPEA
General information:
TITO was launched using:
RESULT:
Template:
3IR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61033 for 748 contacts (-81.6/contact) +
2D Compatibility (PS) -12648 + (NN) -438 + (LL) 456
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -79663.0 ( -106.50 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_3IR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IR3-query.scw
PDB file :
Tito_Scwrl_3IR3.pdb
: