Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVRVPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLASGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDDAKAETILDEVLAAAS
2LQK Chain:A ((1-70))
AGHMKEFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEE------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35154 for 372 contacts (-94.5/contact) +
2D Compatibility (PS) -7318 + (NN) 1390 + (LL) 7936
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -37296.0 ( -100.26 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_2LQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LQK-query.scw
PDB file :
Tito_Scwrl_2LQK.pdb
: