Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEILVTGGAGFQGSHLTESLLANGH------WVTVLDKSSR-NAVRNMQGFRSHDRAAFISGSVTDGQTIDRAVRDHHVVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRY-RNRLIYVSTCEVYGDGHNLKEGERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRPFNIFGVRQKAGRFGALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAYNLVLRTPTLRGQAINFASGKDTRVRDIVEYVADKFGARIE---HRDARPGEVQRFPADISLA-KSIGFQPQVEIWDGIDRYINWAKDQPQYPYEQDGFSGSSVL |
| 1R6D Chain:A ((1-317)) | MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS----GSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE---KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG-GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRGW------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187107 for 2659 contacts (-70.4/contact) +
2D Compatibility (PS) -32599 + (NN) -7392 + (LL) 264
1D Compatibility (HY) -18400 + (ID) 5100
Total energy: -250334.0 ( -94.15 by residue)
QMean score : 0.558
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