Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANLFELENFVAREVDVAPAASGAPHAAGGRL
3KX9 Chain:B ((12-134))
--------------LNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3KX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38118 for 854 contacts (-44.6/contact) +
2D Compatibility (PS) -13651 + (NN) -9030 + (LL) 4320
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -67279.0 ( -78.78 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3KX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KX9-query.scw
PDB file :
Tito_Scwrl_3KX9.pdb
: