Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDARLAPDMFPLARQVQIASDAAKGAGARLAGLEVPSYADTETTFDELQAR------IARTVEFLEGIREEQLDGAEERNVTLKVR--GQEISFNGRDFLFGFALPN-------FFFHVTT------AYAILRHNGVELGKMDFLGGA-------------------------------------- |
| 4KKR Chain:A ((9-241)) | VIEANLSLNQNQLAS---NGGYISSQLGIRNESCETVKFKYWLSIKGPEGI-YFPAKAVVGVDTAG--RMLNVTRGFWVPEYMADGKYTVSLQVVAENGKVFKANQEFVKGVDLNSLPELNGLTIDIKNQFGINSVESTGGFVPFTVDLNNGREGEANVEFWMTAVGPDGLIIPVNAREKWVIASGDTYSKVRGINFDKSYPAGEYTINAQVVDIVSGERVEQSMTVVKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43611 for 979 contacts (-44.5/contact) +
2D Compatibility (PS) -15912 + (NN) 12552 + (LL) 540
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -55481.0 ( -56.67 by residue)
QMean score : 0.146
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