Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALAR-LGIDEPDLARLEHFIGPPLLQC---FMQTYGFDE----ARAWEAVNHYRERFRVT-GLYENRVFDGIPELLEALVGR-GHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSE---GLAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH
2HCF Chain:A ((3-227))
------SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGST-----DFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI
General information:
TITO was launched using:
RESULT:
Template:
2HCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112939 for 1692 contacts (-66.7/contact) +
2D Compatibility (PS) -23183 + (NN) -12337 + (LL) 1396
1D Compatibility (HY) -4000 + (ID) 2400
Total energy: -153463.0 ( -90.70 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_2HCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HCF-query.scw
PDB file :
Tito_Scwrl_2HCF.pdb
: